function oct_nested_ndepo(child_grd,parent_ndepo,child_ndepo)
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
%  compute the ndepo file (PISCES biogeochemical model) 
%  of the embedded grid
%
%  Further Information:  
%  http://www.croco-ocean.org
%  
%  This file is part of CROCOTOOLS
%
%  CROCOTOOLS is free software; you can redistribute it and/or modify
%  it under the terms of the GNU General Public License as published
%  by the Free Software Foundation; either version 2 of the License,
%  or (at your option) any later version.
%
%  CROCOTOOLS is distributed in the hope that it will be useful, but
%  WITHOUT ANY WARRANTY; without even the implied warranty of
%  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
%  GNU General Public License for more details.
%
%  You should have received a copy of the GNU General Public License
%  along with this program; if not, write to the Free Software
%  Foundation, Inc., 59 Temple Place, Suite 330, Boston,
%  MA  02111-1307  USA
%
%  Copyright (c) 2004-2006 by Pierrick Penven 
%  e-mail:Pierrick.Penven@ird.fr  
%  Update : Gildas Cambon: 13 Nov 2009
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
extrapmask=0;
%
% Title
%
title=['ndepo file for the embedded grid :',child_ndepo,...
       ' using oct_parent ndepo file: ',parent_ndepo];
disp(' ')
disp(title)
%
% Read in the embedded grid
%
disp(' ')
disp(' Read in the embedded grid...')
ncid = netcdf.open(child_grd, 'NC_NOWRITE');
parent_grd=ncid.parent_grid(:);
imin=netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'grd_pos'));
imax=netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'grd_pos'));
jmin=netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'grd_pos'));
jmax=netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'grd_pos'));
refinecoeff=netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'refine_coef'));
result=close(ncid);
ncid = netcdf.open(parent_grd, 'NC_NOWRITE');
Lp=netcdf.inqDimLen(ncid, netcdf.inqDimID(ncid, 'xi_rho'));
Mp=netcdf.inqDimLen(ncid, netcdf.inqDimID(ncid, 'eta_rho'));
if extrapmask==1
  mask=netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'mask_rho'));
else
  mask=[];
end
result=close(ncid);
%
% Read in the oct_parent ndepo file
%
disp(' ')
disp(' Read in the oct_parent ndepo file...')
ncid = netcdf.open(parent_ndepo, 'NC_NOWRITE');
ndepot = netcdf.getVar(ncid, netcdf.inqVarID(ncid, 'ndepo_time'));
ndepoc = netcdf.getAtt(ncid, netcdf.inqVarID(ncid, 'ndepo_time'), 'cycle_length');
result=close(ncid);
%
% Create the ndepo file
%
disp(' ')
disp(' Create the ndepo file...')
oct_create_nestedndepo(child_ndepo,parent_ndepo,child_grd,title,...
		  ndepot,ndepoc)
%
% oct_parent indices
%
[igrd_r,jgrd_r]=meshgrid((1:1:Lp),(1:1:Mp));
[igrd_p,jgrd_p]=meshgrid((1:1:Lp-1),(1:1:Mp-1));
[igrd_u,jgrd_u]=meshgrid((1:1:Lp-1),(1:1:Mp));
[igrd_v,jgrd_v]=meshgrid((1:1:Lp),(1:1:Mp-1));
%
% the children indices
%
ipchild=(imin:1/refinecoeff:imax);
jpchild=(jmin:1/refinecoeff:jmax);
irchild=(imin+0.5-0.5/refinecoeff:1/refinecoeff:imax+0.5+0.5/refinecoeff);
jrchild=(jmin+0.5-0.5/refinecoeff:1/refinecoeff:jmax+0.5+0.5/refinecoeff);
[ichildgrd_p,jchildgrd_p]=meshgrid(ipchild,jpchild);
[ichildgrd_r,jchildgrd_r]=meshgrid(irchild,jrchild);
[ichildgrd_u,jchildgrd_u]=meshgrid(ipchild,jrchild);
[ichildgrd_v,jchildgrd_v]=meshgrid(irchild,jpchild);
%
% interpolations
% 
disp(' ')
disp(' Do the interpolations...')                 
np_id = netcdf.open(parent_ndepo, 'NC_NOWRITE');
ncid = netcdf.open(child_ndepo, 'NC_WRITE');
disp('ndepo...')
for tindex=1:length(ndepot)
  oct_interpvar3d(np_id,ncid,igrd_r,jgrd_r,ichildgrd_r,jchildgrd_r,'ndepo',mask,tindex)
  oct_interpvar3d(np_id,ncid,igrd_r,jgrd_r,ichildgrd_r,jchildgrd_r,'noyndepo',mask,tindex)
  oct_interpvar3d(np_id,ncid,igrd_r,jgrd_r,ichildgrd_r,jchildgrd_r,'nhxndepo',mask,tindex)
end
result=close(np_id);
result=close(ncid);
disp(' ')
disp(' Done ')
%
% Make a plot
%
disp(' ')
disp(' Make a plot...')
figure(1)
oct_plot_nestndepo(child_ndepo,'ndepo',[1 6],1)